Anyone with a little bit of contained intellect will know that all military aircraft in Turkish Air Space is controlled by the NATO Allied Air Component Command Izmir (CC-Air Izmir) located at Sirinyer, in the south of Izmir, Turkey. Nothing secret here. Even if it were, Turkey is a sovereign nation and does not need to seek permission from third parties when conducting joint manouvers. Did Israel ask Turkey for an explanation when it was courting Greece, the PKK etc? Turkey has interests like all States. And like all States it needs insurance policies.
Spain investigating ex-IMF chief Rato for fraud (Reuters)
from the article: Growing ties between Turkey, China, Iran worry Israel and U.S.